Stockholm Bioinformatics Center, SBC
Lecture notes: Molecular Bioinformatics 2001, Uppsala University

Lecture 22 Jan 2001 Per Kraulis

Sequence patterns: Regular expressions and hidden Markov models

  1. Regular expressions
  2. PROSITE patterns and rules
  3. Sensitivity and specificity
  4. Sequence profiles
  5. Hidden Markov models
  6. Pfam and HMMER
  7. PSI-BLAST
Copyright © 2001 Per Kraulis $Date: 2001/01/19 14:48:47 $