Old lectures

Some ancient lectures written by Per Kraulis. You may use the text and materials if appropriate acknowledgement is given.

Computing, Python programming

Learning Python (2005)
A course in Python programming for beginners.
Introduction to persistence (2001-05-09)
An introduction to programming for persistence of data: Files, XML and databases.
Seminar on random number generation (2000-06-07)
An introduction to properties of different random number generators.

Biomedicine, bioinformatics and systems biology

Systems Architect notes for SciLifeLab. (2010-03-16) PowerPoint file, PDF file
Some notes about the tasks awaiting the Systems Architect (me) at the SciLifeLab.
The bioinformatics of biological processes. The challenge of temporal data. (2007-10-22) PowerPoint file, PDF file
A presentation of the GeneCV and BioChronicle projects and their background. Given at a lunch seminar for the group of Pär Nordlund at MBB, Karolinska Institute, Stockholm, Sweden.
Bioinformatics for biomedicine (fall 2006)
An introductory course for biomedical students at Biomeedikum, Tartu University, Estonia.
Bioinformatics of biological processes (2006-05-17) PowerPoint file, PDF file
A seminar given at the BIIT group at the Department of Computer Science, Tartu University, Estonia.
Interactions between academia and the pharma industry (2006-05-04) PowerPoint file, PDF file
A seminar given at the Biomeedikum, Tartu University, Estonia. The discussion is based on experience from collaborations between academia and pharma in biomedicine, and explains some potential issues and how to resolve them. The audience consisted primarily of academic scientists, so the focus was to discuss the goals of a company, and how this affects its actions.
Bioinformatics beyond sequences (2006-03-15) PowerPoint file, PDF file
A short lecture given to the Faculty of Medicine at Tartu University, Estonia.
Challenges for bioinformatics in industry and academia (Note: in Swedish! 2005-10-27) PowerPoint file, PDF file
Utmaningar för bioinformatiken inom industri och akademi. En presentation för Industriakademin i Uppsala.
GeneCV. Knowledge Representation of Molecular Events in Cellular Pathways (2003-10-22) PowerPoint file, PDF file
A presentation outlining the basis of the GeneCV project.
Systems biology (2003-02-27)
A lecture given for KTH third-year bioinformatics students.
Classical papers in bioinformatics (spring 2003)
A course for Ph.D. students at the Stockholm Bioinformatics Center (Stockholm University,Karolinska Institute and KTH).
Bioinformatics and Biological Processes (2002-01-23)
SBC seminar on the challenge of functional genomics and systems biology.
Structural Biochemistry and Bioinformatics (fall 2001)
Notes for 5 lectures forming part of a Ph.D. course at Stockholm University.
Making biology computable (2001-04-18)
A lecture at a seminar arranged by Virtual Genomics and Compaq.
Molecular Bioinformatics: a short course (spring 2001)
An introductory five-lecture course on sequence bioinformatics for students at Uppsala University, Sweden.